Hi there 👋
I’m Valentin Goupille — a bioinformatician applying AI and machine learning to understand biological systems and advance medical science.
With a fresh Master’s in Bioinformatics from the University of Rennes, I’m driven to bridge computational research with clinical applications — unlocking insights from complex biological data, whether it’s immune responses in plants or human health. I’m a strong advocate for open science and reproducible research, believing that transparency and collaboration accelerate discovery.
I’m also aspiring to pursue medical studies, to combine my scientific background with clinical practice. When I’m not coding or analyzing data, you’ll find me reading about medical advancements and exploring emerging technologies at the frontier of biology and AI.
My Background
My academic journey from Biology to Bioinformatics, now heading toward Medicine.
My professional experiences in research labs, data analysis, and omics projects.
- Medicine : Immunology, Infectious Diseases, Oncology, Neuroscience, Genomics, Precision Medicine and Surgery.
- Computational Biology : Omics, Single-cell analysis
- Biology : Molecular Biology, Host-Microbe Interactions and Holobiont, Evolutionary Biology, Peptides and Receptors.
- AI and technology : LLM, Computational Vision, World Models and Robotics and their applications in biology and medicine.
- Data Visualization
- Open Source Contributions
Programming
Python R Bash / Shell SQL Neo4j
Statistics & ML
Multivariate analysis Machine learning scikit-learn
Bioinformatics
scRNA-seq Nextflow Scanpy Seurat Phylogenomics Genome assembly Metagenomics
Tools & Infrastructure
Docker Singularity Git HPC / Slurm Quarto Jupyter Marimo